Getting Genetics Done

A while back I showed you how to make volcano plots in base R for visualizing gene expression results. This is just one of many genome-sc...

I forgot where I originally found the code to do this, but I recently had to dig it out again to remind myself how to draw two different y...

At our most recent R user group meeting we were delighted to have presentations from Mark Lawson and Steve Hoang, both bioinformaticians a...

I've been asked a few times how to make a so-called volcano plot from gene expression results. A volcano plot typically plots some meas...

Three years ago I wrote a blog post on how to create manhattan plots in R . After hundreds of comments pointing out bugs and other issues, I...

I'm calling variants from exome sequencing data and I need to evaluate the efficiency of the capture and the coverage along the target r...

Manhattan plots have become the standard way to visualize results for genetic association studies, allowing the viewer to instantly see sig...

I archived and analyzed all Tweets containing #GI2013 from the recent Cold Spring Harbor Genome Informatics meeting, using my previously de...